First commit. Taken from open source branch of internal sample-tracking application.

resources/config.edn

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+{:datomic #include "config/datomic.edn"
+ :application #include "config/application.edn"}

resources/config/application.edn

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+{:roles                        {:admin            "administrator"
+                                :editor           "editor"
+                                :viewer           "viewer"
+                                :site-admin       "site-admin"
+                                :site-coordinator "site-coordinator"}
+ :email                        {:sendgrid-api-key     #env SENDGRID_API_KEY
+                                :sender               #env MANIFEST_EMAIL_SENDER
+                                :manifest-recipient   #env MANIFEST_EMAIL_RECIPIENT
+                                :send-manifest-emails #or [#env SEND_MANIFEST_EMAILS "false"]
+                                :send-vendor-emails   #or [#env SEND_VENDOR_EMAILS "false"]}
+ :temp-path                    "/tmp"
+ :api-key                      #env API_KEY
+ :firebase-js-credentials-path #env FIREBASE_JS_APPLICATION_CREDENTIALS
+ :csv-files                    {:form-type {:headers [:form-type-fields
+                                                      :form-type-name
+                                                      :kit-item-no]}
+                                :kit-type  {:headers [:study-name
+                                                      :cohort-name
+                                                      :kit-item-no
+                                                      :kit-name
+                                                      :sample-id-suffix
+                                                      :sample-name
+                                                      :kit-timepoints
+                                                      :ships-with-kit
+                                                      :sample-reminders
+                                                      :vendor-email
+                                                      :collection-date-optional
+                                                      :air-waybill-optional]}
+                                :site      {:headers [:site
+                                                      :study-names]}
+                                :study     {:headers [:study
+                                                      :participant-id-prefix
+                                                      :participant-id-regex
+                                                      :participant-id-validation-message
+                                                      :kit-id-prefix
+                                                      :kit-id-regex
+                                                      :kit-id-validation-message]}}
+ :sample-export                {:columns-to-drop   [:kit-uuid :timezone :complete :deleted :sample-type-uuid
+                                                    :kit-type-uuid]
+                                :column-order      [:study-name
+                                                    :site-name
+                                                    "Bioinventory Group Name"
+                                                    :sample-id
+                                                    :participant-id
+                                                    :timepoints
+                                                    "PK Timepoint"
+                                                    :collection-date
+                                                    :collection-time
+                                                    "processing-time"
+                                                    :sample-type-name
+                                                    :air-waybill
+                                                    :kit-type-name
+                                                    :kit-id]
+                                :columns-to-rename {:study-name       "BioInventory Project Name"
+                                                    :site-name        "Site"
+                                                    :sample-id        "Originating ID"
+                                                    :participant-id   "Participant ID"
+                                                    :timepoints       "Visit"
+                                                    :collection-date  "Collection Date"
+                                                    :collection-time  "Collection Time"
+                                                    "processing-time" "Processing Time"
+                                                    :sample-type-name "Sample"
+                                                    :air-waybill      "Air Waybill"
+                                                    :kit-type-name    "Kit"
+                                                    :kit-id           "Kit ID"}}}

resources/config/datomic.edn

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+{:endpoint           #or [#env DATOMIC_ENDPOINT "localhost:8998"]
+ :access-key         #or [#env DATOMIC_ACCESS_KEY "myaccesskey"]
+ :secret             #or [#env DATOMIC_SECRET "mysecret"]
+ :db-name            #or [#env DATOMIC_DB_NAME "ereq-dev"]
+ :validate-hostnames #profile {:default    false
+                               :staging    false
+                               :production false}}

resources/log4j.properties

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+log4j.rootLogger=WARN, console
+log4j.appender.console=org.apache.log4j.ConsoleAppender
+log4j.appender.console.layout=org.apache.log4j.PatternLayout
+log4j.appender.console.layout.ConversionPattern=%-5p %c: %m%n
+
+log4j.logger.org.eclipse.jetty=WARN

resources/logback.xml

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+<!-- Logback configuration. See http://logback.qos.ch/manual/index.html -->
+<configuration>
+  <!-- Console output -->
+  <appender name="STDOUT" class="ch.qos.logback.core.ConsoleAppender">
+    <!-- encoder defaults to ch.qos.logback.classic.encoder.PatternLayoutEncoder -->
+    <encoder>
+      <pattern>%-5level %logger{36} - %msg%n</pattern>
+    </encoder>
+    <!-- Only log level INFO and above -->
+    <filter class="ch.qos.logback.classic.filter.ThresholdFilter">
+      <level>INFO</level>
+    </filter>
+  </appender>
+
+  <!-- Enable FILE and STDOUT appenders for all log messages.
+       By default, only log at level INFO and above. -->
+  <root level="WARN">
+    <appender-ref ref="STDOUT" />
+  </root>
+
+  <!-- For loggers in the ".*" namespace, log at all levels. -->
+  <logger name="starter" level="INFO" />
+</configuration>

resources/public/css/app.css

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+@font-face {
+  font-family: 'Px Grotesk';
+  src: url('fonts/PxGrotesk-Bold.woff2') format('woff2'),
+      url('fonts/PxGrotesk-Bold.woff') format('woff');
+  font-weight: bold;
+  font-style: normal;
+  font-display: swap;
+}
+
+@font-face {
+  font-family: 'Px Grotesk';
+  src: url('fonts/PxGrotesk-BoldIta.woff2') format('woff2'),
+      url('fonts/PxGrotesk-BoldIta.woff') format('woff');
+  font-weight: bold;
+  font-style: italic;
+  font-display: swap;
+}
+
+@font-face {
+  font-family: 'Px Grotesk';
+  src: url('fonts/PxGrotesk-Light.woff2') format('woff2'),
+      url('fonts/PxGrotesk-Light.woff') format('woff');
+  font-weight: 300;
+  font-style: normal;
+  font-display: swap;
+}
+
+@font-face {
+  font-family: 'Px Grotesk';
+  src: url('fonts/PxGrotesk-Regular.woff2') format('woff2'),
+      url('fonts/PxGrotesk-Regular.woff') format('woff');
+  font-weight: normal;
+  font-style: normal;
+  font-display: swap;
+}
+
+@font-face {
+  font-family: 'Px Grotesk';
+  src: url('fonts/PxGrotesk-LightIta.woff2') format('woff2'),
+      url('fonts/PxGrotesk-LightIta.woff') format('woff');
+  font-weight: 300;
+  font-style: italic;
+  font-display: swap;
+}
+
+@font-face {
+  font-family: 'Px Grotesk';
+  src: url('fonts/PxGrotesk-RegularIta.woff2') format('woff2'),
+      url('fonts/PxGrotesk-RegularIta.woff') format('woff');
+  font-weight: normal;
+  font-style: italic;
+  font-display: swap;
+}
+
+@font-face {
+  font-family: 'Px Grotesk Screen';
+  src: url('fonts/PxGrotesk-Screen.woff2') format('woff2'),
+      url('fonts/PxGrotesk-Screen.woff') format('woff');
+  font-weight: normal;
+  font-style: normal;
+  font-display: swap;
+}
+
+*{font-family:'Px Grotesk';}
+
+body {
+  background-color: black;
+  font-size: 1rem!important;
+}
+
+.main {
+  text-align: center;
+  width: 100%;
+}
+
+.header {
+  margin: 0px auto;
+  padding: 5px;
+  background: #343a40!important;
+  color: white;
+  font-size: 20px;
+}
+
+.header.manifest {
+  background: white!important;
+  color: black;
+}
+
+
+.header .content {
+  text-align: left;
+  top: 16px;
+  left: 16px;
+}
+
+.header .content .title {
+  display: inline-block;
+}
+
+.header .content .log-in-out-link {
+  float: right;
+}
+
+.header .content .console-link {
+  float: right;
+  clear: right;
+}
+
+.header .bars {
+  text-align: left;
+  left: 16px;
+}
+
+.page-body {
+  padding: 10px;
+  text-align: center;
+  max-width: 1000px;
+  margin: auto;
+  color: white;
+}
+
+.page-body.manifest {
+  padding: 10px;
+  text-align: center;
+  max-width: 1000px;
+  margin: auto;
+  color: black;
+}
+
+.page-body table {
+  text-align: left;
+  margin-bottom: .5em;
+}
+
+.list-body {
+  padding: 10px;
+  text-align: center;
+  max-width: 1500px;
+  margin: auto;
+  color: white;
+}
+
+.list-body table {
+  text-align: left;
+  margin-bottom: .5em;
+  border-collapse: separate;
+  border-spacing: 10px 5px;
+}
+
+div.spacer {
+  display: inline-block;
+  width: 5px;
+}
+
+/* Apply style colors to a links */
+a {
+  color: #685bc7!important;
+}
+
+a:hover {
+  color: #4a4c9b!important;
+}
+
+a:active {
+  color: #313377!important;
+}
+
+a.disabled {
+  color: #a197e6!important;
+  pointer-events: none;
+  cursor: default;
+}
+
+/* Apply theme colors to reactstrap elements */
+.btn-secondary {
+  background-color: #685bc7;
+  border-color: #685bc7;
+}
+
+.btn-secondary:hover {
+  background-color: #4a4c9b;
+  border-color: #4a4c9b;
+}
+
+.btn-secondary:active {
+  background-color: #313377;
+  border-color: #313377;
+}
+
+.btn-secondary:focus {
+  background-color: #313377;
+  border-color: #313377;
+}
+
+.btn-secondary:not(:disabled):not(.disabled):active {
+  background-color: #313377;
+  border-color: #313377;
+}
+
+.btn-secondary.disabled,
+.btn-secondary:disabled {
+  background-color: #a197e6;
+  border-color: #a197e6;
+}
+
+/* Make React Select Menu List items have black font */
+
+.react-select__menu-list {
+  color: black!important;
+}
+
+/* Disable red box outline in Firefox */
+input:required {
+  box-shadow:none!important;
+}
+input:invalid {
+  box-shadow:none!important;
+}
+
+select[name=amPm] {
+  box-shadow:none!important;
+}
+
+/* Blueprint Styling */
+
+.bp3-input {
+  font-size: 1rem!important;
+}
+
+/* Editext Styling */
+
+button[editext] {
+  border-radius: .25rem;
+  padding: 2px;
+  background-color: #685bc7;
+  border-color: #685bc7;
+  color: white;
+}
+
+button[editext]:hover {
+  background-color: #4a4c9b;
+  border-color: #4a4c9b;
+}
+
+button[editext="input"] {
+  width: auto!important;
+}
+
+/* Tooltip styling */
+.tooltip-inner {
+  background: #343a40!important;
+}
+
+.bs-tooltip-auto[x-placement^=top] .arrow::before, .bs-tooltip-top .arrow::before {
+  border-top-color: #343a40!important;
+}
+
+/* Datetime picker */
+.react-datetime-picker__wrapper {
+    background: white;
+    border: 0;
+    border-radius: .25rem;
+    font-size: 1.25em;
+    color: black;
+}
+
+.react-datetime-picker__inputGroup__input {
+  color: black!important;
+}
+
+.react-datetime-picker__inputGroup__input:invalid {
+  background: none!important;
+}
+
+/* Checkbox stuff */
+
+.Checkbox_themed {
+  padding-left: 1.2em;
+}
+
+.Checkbox__input_themed {
+  position: absolute;
+  width: 1px;
+  height: 1px;
+
+  overflow: hidden;
+  clip: rect(0 0 0 0);
+
+  -webkit-appearance: none;
+  -moz-appearance: none;
+  appearance: none;
+}
+
+.Checkbox__image_themed {
+  position: absolute;
+  margin-left: -1.2em;
+  width: 1em;
+  height: 1em;
+}
+
+.bootstrap-checkbox {
+  padding-left: 1.5rem;
+  margin-bottom: 1em;
+}
+
+.bootstrap-checkbox__image {
+  margin-left: -1.5rem;
+
+  border: #adb5bd solid 1px;
+  border-radius: .25rem;
+
+  background-color: #fff;
+
+  transition: background-color .15s ease-in-out,border-color .15s ease-in-out,box-shadow .15s ease-in-out;
+}
+.bootstrap-checkbox__input:checked + .bootstrap-checkbox__image {
+  border-color: #564bac;
+  background: #685bc7 url(data:image/svg+xml;base64,PHN2ZyB4bWxucz0naHR0cDovL3d3dy53My5vcmcvMjAwMC9zdmcnIHZpZXdCb3g9JzAgMCA4IDgnPjxwYXRoIGZpbGw9JyNmZmYnIGQ9J002LjU2NC43NWwtMy41OSAzLjYxMi0xLjUzOC0xLjU1TDAgNC4yNiAyLjk3NCA3LjI1IDggMi4xOTN6Jy8+PC9zdmc+) no-repeat 50%/50% 50%;
+}
+.bootstrap-checkbox__input_indeterminate + .bootstrap-checkbox__image {
+  border-color: #5247a8;
+  background: #685bc7 url("data:image/svg+xml,%3csvg xmlns='http://www.w3.org/2000/svg' viewBox='0 0 4 4'%3e%3cpath stroke='%23fff' d='M0 2h4'/%3e%3c/svg%3e") no-repeat 50%/50% 50%;
+}
+.bootstrap-checkbox__input:disabled + .bootstrap-checkbox__image {
+  border-color: #888c91;
+  background-color: #b3b7bb;
+}
+.bootstrap-checkbox__input:checked:disabled + .bootstrap-checkbox__image,
+.bootstrap-checkbox__input_indeterminate:disabled + .bootstrap-checkbox__image {
+  border-color: #8077c0;
+  background-color: #a197e6;
+}
+.bootstrap-checkbox__input:focus + .bootstrap-checkbox__image {
+  box-shadow: 0 0 0 0.2rem #776cbe;
+}
+
+.bootstrap-checkbox__label {
+  vertical-align: middle;
+}
+
+/* Date picker stuff */
+
+.bp3-datepicker .DayPicker-Day.DayPicker-Day--selected {
+  background-color: #685bc7!important;
+}

resources/public/index.html

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+<!doctype html>
+<html lang="en">
+<head>
+    <meta charset="utf-8">
+    <meta name="viewport"
+          content="width=device-width, initial-scale=1, shrink-to-fit=no">
+    <meta name="description" content="">
+    <meta name="author" content="">
+
+    <title>PICI Sample Tracking</title>
+
+    <!-- Bootstrap core CSS -->
+    <link href="/css/bootstrap.min.css" rel="stylesheet">
+    <link href="/css/app.css" rel="stylesheet">
+    <link rel="icon" type="image/png" sizes="32x32" href="/favicon-32x32.png">
+    <link rel="icon" type="image/png" sizes="16x16" href="/favicon-16x16.png">
+</head>
+
+<body>
+<main role="main" class="main">
+    <div id="app"></div>
+</main>
+
+<script src="/cljs-out/main.js" type="text/javascript"></script>
+<script>
+      org.parkerici.sample_tracking.core.init();
+
+</script>
+</body>
+</html>